- Predicted Gene MLOC_12619
MLOC_12619 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 88.9986 | 66.0319 | 75.2487 | 73.6085 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 87.2763 | 128.032 | 159.18 | 100.342 |
INF1 | Young developing inflorescences (5mm) | 23.332 | 30.5434 | 36.423 | 25.8422 |
INF2 | Developing inflorescences (1-1.5 cm) | 26.1047 | 27.7514 | 32.1189 | 32.1305 |
ROO | Roots from the seedlings (10 cm shoot stage) | 251.997 | 166.634 | 145.023 | 201.91 |
NOD | Developing tillers at six leaf stage, 3rd internode | 118.709 | 170.919 | 245.995 | 561.038 |
CAR5 | Developing grain, bracts removed (5 DPA) | 55.0146 | 55.4625 | 52.7824 | 55.6729 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.4795 | 9.99571 | 10.0025 | 25.9071 |
CDS Structure of MLOC_12619
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12619.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g32580.1 |
+2 |
3e-125 |
366 |
179/191 (94%) |
13103.m03707 protein BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed |
TAIR PP10 |
AT5G21090.1 |
+2 |
7e-90 |
275 |
129/191 (68%) |
Leucine-rich repeat (LRR) family protein | chr5:7164758-7166904 FORWARD LENGTH=218 |