MLOC_12619 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains88.998666.031975.248773.6085
LEAShoots from the seedlings (10 cm shoot stage)87.2763128.032159.18100.342
INF1Young developing inflorescences (5mm)23.33230.543436.42325.8422
INF2Developing inflorescences (1-1.5 cm)26.104727.751432.118932.1305
ROORoots from the seedlings (10 cm shoot stage)251.997166.634145.023201.91
NODDeveloping tillers at six leaf stage, 3rd internode118.709170.919245.995561.038
CAR5Developing grain, bracts removed (5 DPA)55.014655.462552.782455.6729
CAR15Developing grain, bracts removed (15 DPA)11.47959.9957110.002525.9071



CDS Structure of MLOC_12619






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12619.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248267.1NoneNoneNoneNone
MLOC_12619.1CUST_1192_PI427708080AvailableAvailablecontig_1563733 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g32580.1 +2 3e-125 366 179/191 (94%) 13103.m03707 protein BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
TAIR PP10 AT5G21090.1 +2 7e-90 275 129/191 (68%) Leucine-rich repeat (LRR) family protein | chr5:7164758-7166904 FORWARD LENGTH=218