- Predicted Gene MLOC_12615
MLOC_12615 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 42.0995 | 43.7867 | 45.6699 | 42.2196 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 35.6447 | 23.68 | 23.2853 | 22.9826 |
| INF1 | Young developing inflorescences (5mm) | 26.0029 | 20.02 | 21.3186 | 18.832 |
| INF2 | Developing inflorescences (1-1.5 cm) | 16.4417 | 17.3527 | 18.8136 | 18.8185 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 28.6912 | 30.7785 | 30.6089 | 34.5709 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 21.5369 | 17.548 | 16.0432 | 57.0291 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 39.5889 | 41.0105 | 42.1407 | 39.1229 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.7722 | 17.1942 | 15.1492 | 37.8825 |
CDS Structure of MLOC_12615
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12615.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g33720.1 |
-3 |
0.0 |
651 |
350/396 (88%) |
13108.m03518 protein lactate/malate dehydrogenase, putative, expressed |
| TAIR PP10 |
AT3G47520.1 |
-3 |
0.0 |
542 |
280/346 (81%) |
| Symbols: MDH | malate dehydrogenase | chr3:17513657-17514868 FORWARD LENGTH=403 |