- Predicted Gene MLOC_12581
MLOC_12581 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12581_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12581_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 397.748 | 263.602 | 298.112 | 267.081 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 155.086 | 206.939 | 91.4966 | 107.947 |
INF1 | Young developing inflorescences (5mm) | 1.12418 | 0.0854193 | 0.0955035 | 0.380009 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.112482 | 0.176462 | 0.093798 | 0.136324 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1080.91 | 996.835 | 1220.62 | 971.956 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.34006 | 4.9171 | 5.2265 | 12.104 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.140191 | 0.17466 | 0.0931038 | 0.1188 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.275939 | 0.10135 | 0.453594 |
CDS Structure of MLOC_12581
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12581.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g11500.1 |
-2 |
1e-92 |
283 |
136/178 (76%) |
13110.m01042 protein SCP-like extracellular protein, expressed |
TAIR PP10 |
AT4G33720.1 |
-2 |
1e-55 |
185 |
87/161 (54%) |
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr4:16182813-16183304 FORWARD LENGTH=163 |