MLOC_12559 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2708670.8118410.2698830.390778
LEAShoots from the seedlings (10 cm shoot stage)0.6652850.2561160.06059110.246827
INF1Young developing inflorescences (5mm)0.2595650.1753170.3010190.149917
INF2Developing inflorescences (1-1.5 cm)0.3004130.1564890.1956330.194976
ROORoots from the seedlings (10 cm shoot stage)0.1521470.3529310.1473660.272408
NODDeveloping tillers at six leaf stage, 3rd internode0.1593190.2997570.4810040.900752
CAR5Developing grain, bracts removed (5 DPA)0.2530750.3191320.4862770.228673
CAR15Developing grain, bracts removed (15 DPA)0.2138210.1450360.2133210.34296



CDS Structure of MLOC_12559






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12559.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12559.3CUST_8950_PI427708080AvailableAvailablecontig_1563557 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g39950.1 -2 0.0 615 311/401 (78%) 13108.m04268 protein potassium transporter, putative, expressed
TAIR PP10 AT4G13420.1 -2 1e-77 261 134/332 (40%) | Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785