- Predicted Gene MLOC_12558
MLOC_12558 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12558_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12558_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.24156 | 6.2523 | 6.80751 | 5.93119 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.84417 | 6.69521 | 6.16178 | 4.33659 |
INF1 | Young developing inflorescences (5mm) | 2.06665 | 3.81328 | 3.84024 | 2.30756 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.28272 | 2.35692 | 1.87742 | 2.16973 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.8035 | 8.33938 | 7.90387 | 8.65817 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.14273 | 7.53406 | 8.39516 | 20.0827 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.10308 | 4.8023 | 3.62704 | 3.28585 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.5108 | 1.15538 | 2.10478 | 3.31614 |
CDS Structure of MLOC_12558
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12558.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g39960.1 |
+1 |
1e-127 |
377 |
232/281 (83%) |
13108.m04269 protein 3-oxoacyl-reductase, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT1G63380.1 |
+1 |
2e-88 |
276 |
161/270 (60%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr1:23505582-23506504 FORWARD LENGTH=282 |