- Predicted Gene MLOC_12555
MLOC_12555 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12555_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12555_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.41513 | 3.29453 | 2.66358 | 3.16117 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.85545 | 2.46593 | 1.70213 | 2.43191 |
INF1 | Young developing inflorescences (5mm) | 6.14435 | 6.20506 | 7.80784 | 5.83594 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.8799 | 10.5633 | 11.2583 | 11.902 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.29289 | 2.21452 | 1.58034 | 2.71138 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.73206 | 4.65778 | 4.20719 | 16.9659 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.01328 | 8.58346 | 9.79318 | 8.90171 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.90996 | 4.93256 | 4.38721 | 11.3321 |
CDS Structure of MLOC_12555
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12555.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g02464.1 |
-1 |
0.0 |
1214 |
585/708 (83%) |
13111.m00177 protein vacuolar-sorting receptor precursor, putative, expressed |
TAIR PP10 |
AT3G52850.1 |
-1 |
0.0 |
1004 |
456/606 (75%) |
| Symbols: VSR1, BP-80, ATELP, BP80, BP80B, ATELP1, ATVSR1, GFS1, VSR1;1, BP80-1;1 | vacuolar sorting receptor homolog 1 | chr3:19587999-19591690 FORWARD LENGTH=623 |