- Predicted Gene MLOC_12553
MLOC_12553 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12553_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12553_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 229.762 | 178.035 | 195.583 | 219.317 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 427.476 | 395.655 | 398.045 | 376.918 |
INF1 | Young developing inflorescences (5mm) | 11.308 | 4.98431 | 4.81136 | 6.57125 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.32873 | 6.63283 | 8.75407 | 8.51414 |
ROO | Roots from the seedlings (10 cm shoot stage) | 463.544 | 423.06 | 349.573 | 581.562 |
NOD | Developing tillers at six leaf stage, 3rd internode | 438.271 | 361.116 | 435.585 | 1279.75 |
CAR5 | Developing grain, bracts removed (5 DPA) | 65.3909 | 62.492 | 57.9945 | 72.6092 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.07077 | 9.0846 | 7.39179 | 22.8503 |
CDS Structure of MLOC_12553
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12553.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g13210.2 |
+1 |
6e-30 |
117 |
99/124 (80%) |
13101.m01452 protein salt stress root protein RS1, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |