- Predicted Gene MLOC_12547
MLOC_12547 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12547_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12547_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.840136 | 0.709519 | 0.770228 | 0.745194 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.153387 | 0.079354 | 0.191735 | 0.125849 |
INF1 | Young developing inflorescences (5mm) | 0.0423462 | 0.086257 | 0.268056 | 0.100872 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.232746 | 0.18717 | 0.0891338 | 0.194498 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.554367 | 0.352945 | 0.577248 | 0.505453 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0785861 | 0.0472076 | 0.0233869 | 0.152559 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0382342 | 0.0695575 | 0.086835 | 0.0637812 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_12547
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12547.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g43870.1 |
+2 |
3e-77 |
244 |
139/226 (62%) |
13108.m04752 protein carrier, putative |
TAIR PP10 |
AT2G17080.1 |
+2 |
3e-15 |
76 |
66/250 (26%) |
Arabidopsis protein of unknown function (DUF241) | chr2:7433326-7434117 REVERSE LENGTH=263 |