- Predicted Gene MLOC_12539
MLOC_12539 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12539_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12539_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.274219 | 0.585126 | 0.493265 | 0.465412 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.361952 | 0.286645 | 0.134358 | 0.73193 |
CDS Structure of MLOC_12539
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12539.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g05730.1 |
+1 |
2e-130 |
390 |
189/199 (95%) |
13103.m00618 protein cell division control protein 48 homolog E, putative, expressed |
TAIR PP10 |
AT5G03340.1 |
+1 |
4e-127 |
381 |
185/199 (93%) |
ATPase, AAA-type, CDC48 protein | chr5:810091-813133 REVERSE LENGTH=810 |