MLOC_12516 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.677786.331578.629164.5574
LEAShoots from the seedlings (10 cm shoot stage)99.243292.881480.589775.382
INF1Young developing inflorescences (5mm)123.767129.696123.69695.7732
INF2Developing inflorescences (1-1.5 cm)130.044146.954131.611138.435
ROORoots from the seedlings (10 cm shoot stage)39.664673.140856.41376.2772
NODDeveloping tillers at six leaf stage, 3rd internode53.070355.166441.8312169.32
CAR5Developing grain, bracts removed (5 DPA)110.05798.9531108.95794.0049
CAR15Developing grain, bracts removed (15 DPA)44.255243.087147.44889.9894



CDS Structure of MLOC_12516






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370602
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370602CUST_21979_PI427708080NoneNoneNone
MLOC_12516.1NoneAvailableAvailablecontig_1563457 (Mapped)
MLOC_23339.1NoneAvailableNonecontig_1621126 (Mapped)
MLOC_78372.1NoneAvailableNonecontig_79930 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----