MLOC_12515 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.579767.938567.758228.53831
LEAShoots from the seedlings (10 cm shoot stage)8.982220.9518024.409644.2961
INF1Young developing inflorescences (5mm)30.608634.500533.850929.304
INF2Developing inflorescences (1-1.5 cm)28.437432.217126.510734.4014
ROORoots from the seedlings (10 cm shoot stage)4.546015.723084.905796.92105
NODDeveloping tillers at six leaf stage, 3rd internode6.411175.14352.973416.8263
CAR5Developing grain, bracts removed (5 DPA)13.557611.527311.280612.4436
CAR15Developing grain, bracts removed (15 DPA)0.6041410.2440370.5108021.12499



CDS Structure of MLOC_12515






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12515.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374955NoneNoneNoneNone
MLOC_12515.3CUST_1178_PI427708080AvailableAvailablecontig_1563455 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02370.1 +2 0.0 613 304/371 (82%) 13108.m00176 protein galactosyltransferase family protein, putative, expressed
TAIR PP10 AT1G32930.1 +2 1e-142 417 210/378 (56%) Galactosyltransferase family protein | chr1:11931980-11934399 REVERSE LENGTH=399