- Predicted Gene MLOC_12515
MLOC_12515 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.57976 | 7.93856 | 7.75822 | 8.53831 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.98222 | 0.951802 | 4.40964 | 4.2961 |
INF1 | Young developing inflorescences (5mm) | 30.6086 | 34.5005 | 33.8509 | 29.304 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.4374 | 32.2171 | 26.5107 | 34.4014 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.54601 | 5.72308 | 4.90579 | 6.92105 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.41117 | 5.1435 | 2.9734 | 16.8263 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.5576 | 11.5273 | 11.2806 | 12.4436 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.604141 | 0.244037 | 0.510802 | 1.12499 |
CDS Structure of MLOC_12515
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12515.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g02370.1 |
+2 |
0.0 |
613 |
304/371 (82%) |
13108.m00176 protein galactosyltransferase family protein, putative, expressed |
TAIR PP10 |
AT1G32930.1 |
+2 |
1e-142 |
417 |
210/378 (56%) |
Galactosyltransferase family protein | chr1:11931980-11934399 REVERSE LENGTH=399 |