- Predicted Gene MLOC_12497
MLOC_12497 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12497_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12497_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 23.6722 | 12.9291 | 14.7799 | 14.5096 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.1298 | 8.60251 | 13.4002 | 7.69797 |
INF1 | Young developing inflorescences (5mm) | 17.9903 | 20.1192 | 23.7056 | 13.713 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.4103 | 14.9013 | 17.2135 | 13.8887 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.2724 | 15.8409 | 16.5201 | 16.0028 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.92356 | 7.28102 | 10.0093 | 21.9167 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.8466 | 15.2641 | 17.1095 | 12.168 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.20146 | 4.19835 | 4.65022 | 7.77759 |
CDS Structure of MLOC_12497
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12497.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g46130.1 |
-3 |
4e-40 |
155 |
75/84 (89%) |
13102.m05175 protein tRNA synthetases class II domain containing protein, expressed |
TAIR PP10 |
AT4G31180.2 |
-3 |
2e-35 |
140 |
66/84 (79%) |
Class II aminoacyl-tRNA and biotin synthetases superfamily protein | chr4:15156696-15159362 FORWARD LENGTH=558 |