MLOC_12495 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.558345.694615.688566.08009
LEAShoots from the seedlings (10 cm shoot stage)5.093123.566243.855534.0389
INF1Young developing inflorescences (5mm)10.00811.668910.777310.7631
INF2Developing inflorescences (1-1.5 cm)15.0712.70711.212216.2879
ROORoots from the seedlings (10 cm shoot stage)2.237613.163663.157164.36374
NODDeveloping tillers at six leaf stage, 3rd internode3.362533.041183.4921711.2477
CAR5Developing grain, bracts removed (5 DPA)5.23275.735385.279056.19704
CAR15Developing grain, bracts removed (15 DPA)3.689673.307984.210569.90606



CDS Structure of MLOC_12495






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363651
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363651CUST_20754_PI427708080NoneNoneNone
MLOC_12495.1NoneAvailableAvailablecontig_1563409 (Mapped)
MLOC_26000.1NoneAvailableNonecontig_1727738 (Not mapped)
MLOC_31450.1NoneAvailableNonecontig_2190133 (Not mapped)
MLOC_36128.1NoneAvailableNonecontig_2536597 (Not mapped)
MLOC_36201.1NoneAvailableNonecontig_2539344 (Not mapped)
MLOC_3715.1NoneAvailableNonecontig_1328657 (Not mapped)
MLOC_56346.1NoneAvailableNonecontig_407438 (Not mapped)
MLOC_72288.1NoneAvailableNonecontig_613742 (Not mapped)
MLOC_75645.1NoneAvailableNonecontig_684900 (Not mapped)
MLOC_80869.1NoneAvailableNonecontig_932854 (Not mapped)
MLOC_81763.1NoneAvailableNonecontig_980815 (Not mapped)
MLOC_926.1NoneAvailableNonecontig_1077014 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----