- Predicted Gene MLOC_12482
MLOC_12482 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12482_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12482_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 31.3984 | 27.7913 | 30.2008 | 28.7939 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 38.5838 | 44.2202 | 67.2923 | 41.1945 |
INF1 | Young developing inflorescences (5mm) | 1.94844 | 2.00209 | 1.72794 | 1.61151 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.803183 | 1.10329 | 0.92835 | 1.03287 |
ROO | Roots from the seedlings (10 cm shoot stage) | 34.776 | 30.5854 | 30.0392 | 35.385 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.6609 | 19.8524 | 13.713 | 53.6498 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.51531 | 3.81144 | 4.30714 | 3.65954 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.24037 | 1.8165 | 1.56795 | 4.46503 |
CDS Structure of MLOC_12482
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12482.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g33310.1 |
-1 |
0.0 |
543 |
287/334 (86%) |
13105.m03442 protein oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed |
TAIR PP10 |
AT4G02940.1 |
-1 |
2e-108 |
350 |
193/358 (54%) |
oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr4:1306658-1310699 FORWARD LENGTH=569 |