MLOC_12451 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.168310.990312.047912.4674
LEAShoots from the seedlings (10 cm shoot stage)0.6868840.2267470.07978510.302399
INF1Young developing inflorescences (5mm)2.814563.240873.064532.75586
INF2Developing inflorescences (1-1.5 cm)2.990492.644971.915652.99853
ROORoots from the seedlings (10 cm shoot stage)2.284424.271683.066735.24343
NODDeveloping tillers at six leaf stage, 3rd internode0.626610.9160441.394863.58636
CAR5Developing grain, bracts removed (5 DPA)7.188177.07886.777337.27135
CAR15Developing grain, bracts removed (15 DPA)7.709626.7977.3434217.7787



CDS Structure of MLOC_12451






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12451.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12451.3CUST_8933_PI427708080AvailableAvailablecontig_1563318 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g09460.1 -1 0.0 657 372/459 (81%) 13101.m01006 protein hexokinase, putative, expressed
TAIR PP10 AT4G29130.1 -1 7e-159 468 258/431 (60%) | Symbols: ATHXK1, GIN2, HXK1 | hexokinase 1 | chr4:14352338-14354865 REVERSE LENGTH=496