MLOC_12446 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1166.42793.839824.2981057.89
LEAShoots from the seedlings (10 cm shoot stage)1074.82488.036460.231640.985
INF1Young developing inflorescences (5mm)1562.61503.481687.671524.04
INF2Developing inflorescences (1-1.5 cm)1952.681704.252072.512354.16
ROORoots from the seedlings (10 cm shoot stage)1447.83944.7361151.581548.66
NODDeveloping tillers at six leaf stage, 3rd internode360.859364.458338.4161363.22
CAR5Developing grain, bracts removed (5 DPA)582.635507.578482.72603.577
CAR15Developing grain, bracts removed (15 DPA)229.907203.151217.707560.211



CDS Structure of MLOC_12446






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248694.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248694.1CUST_18591_PI427708080NoneNoneNone
MLOC_12446.5NoneAvailableAvailablecontig_1563308 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----