MLOC_12429 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.162625.278225.864128.9549
LEAShoots from the seedlings (10 cm shoot stage)19.91569.5474211.892112.1168
INF1Young developing inflorescences (5mm)2.98084.92173.377273.91949
INF2Developing inflorescences (1-1.5 cm)3.560552.443352.183313.55327
ROORoots from the seedlings (10 cm shoot stage)91.083269.629782.3412100.158
NODDeveloping tillers at six leaf stage, 3rd internode98.777759.032689.8554196.465
CAR5Developing grain, bracts removed (5 DPA)37.46142.268239.362848.6178
CAR15Developing grain, bracts removed (15 DPA)11.811314.620310.85735.8349



CDS Structure of MLOC_12429






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12429.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353995NoneNoneNoneNone
MLOC_12429.3CUST_102_PI427708083AvailableAvailablecontig_1563267 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g23280.4 -1 9e-29 116 60/68 (88%) 13112.m08914 protein heavy metal-associated domain containing protein, expressed
TAIR PP10 AT1G01490.2 -1 3e-19 87 41/59 (69%) Heavy metal transport/detoxification superfamily protein | chr1:180401-182066 REVERSE LENGTH=177