- Predicted Gene MLOC_12403
MLOC_12403 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12403_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12403_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.9642 | 10.7377 | 10.9974 | 11.426 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.47488 | 3.38531 | 5.60842 | 3.49255 |
INF1 | Young developing inflorescences (5mm) | 15.0837 | 11.9335 | 12.7965 | 11.4913 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.56172 | 6.77804 | 6.47594 | 7.2996 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.75478 | 11.9132 | 9.12779 | 12.668 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.38207 | 0.46124 | 1.41124 | 1.90229 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.04834 | 7.87469 | 9.47718 | 8.37912 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.51489 | 2.44614 | 2.34284 | 5.74839 |
CDS Structure of MLOC_12403
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12403.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g16870.1 |
-2 |
2e-154 |
444 |
237/295 (80%) |
13103.m02007 protein expressed protein |
TAIR PP10 |
AT3G04020.1 |
-2 |
2e-75 |
241 |
127/296 (43%) |
unknown protein; Has 26 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr3:1040548-1042377 FORWARD LENGTH=304 |