- Predicted Gene MLOC_12353
MLOC_12353 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.12406 | 3.35944 | 3.39672 | 4.73375 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.20701 | 0.284824 | 0.228895 | 0.482946 |
| INF1 | Young developing inflorescences (5mm) | 12.4859 | 16.9115 | 18.5304 | 16.8039 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.4044 | 15.4768 | 12.0272 | 18.3405 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.89481 | 3.60111 | 2.91625 | 5.07477 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.127799 | 0.230593 | 0.126389 | 0.670272 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.52447 | 4.49105 | 3.72506 | 5.36725 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.865584 | 0.561489 | 0.764285 | 2.01864 |
CDS Structure of MLOC_12353
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12353.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g53970.1 |
+2 |
1e-90 |
280 |
208/325 (64%) |
13103.m05911 protein expressed protein |
| TAIR PP10 |
AT4G17240.1 |
+2 |
2e-44 |
160 |
105/245 (43%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; Has 1142 Blast hits to 1055 proteins in 252 species: Archae - 22; Bacteria - 318; Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other Eukaryotes - 396 (source: NCBI BLink). | chr4:9666799-9668292 REVERSE LENGTH=343 |