- Predicted Gene MLOC_12333
MLOC_12333 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12333_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12333_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.59864 | 2.79495 | 2.80632 | 2.64427 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.92714 | 2.27521 | 1.87274 | 1.98721 |
INF1 | Young developing inflorescences (5mm) | 6.993 | 8.55301 | 8.63637 | 6.26746 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.3493 | 11.0775 | 10.1924 | 10.9872 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.57342 | 3.99297 | 3.12415 | 3.96144 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.72552 | 2.41916 | 4.69025 | 9.02213 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.2225 | 4.44973 | 3.60426 | 3.76542 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.09473 | 1.62543 | 1.10446 | 2.75918 |
CDS Structure of MLOC_12333
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12333.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g13850.1 |
-1 |
0.0 |
787 |
399/517 (77%) |
13103.m01611 protein cell cycle checkpoint protein RAD17, putative, expressed |
TAIR PP10 |
AT5G66130.1 |
-1 |
5e-131 |
402 |
233/518 (45%) |
| Symbols: ATRAD17, RAD17 | RADIATION SENSITIVE 17 | chr5:26434236-26437091 FORWARD LENGTH=599 |