- Predicted Gene MLOC_12326
MLOC_12326 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.1903 | 10.8531 | 12.8801 | 11.7177 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.2592 | 12.8773 | 12.6421 | 10.9714 |
| INF1 | Young developing inflorescences (5mm) | 7.1178 | 6.98578 | 7.99996 | 6.58759 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.60453 | 7.11412 | 8.56662 | 8.67574 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.9742 | 18.2561 | 19.196 | 24.0026 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.5489 | 11.9069 | 10.7555 | 37.388 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.7481 | 12.6251 | 12.0974 | 12.1073 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.33237 | 4.82045 | 5.0444 | 12.4866 |
CDS Structure of MLOC_12326
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12326.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g19130.1 |
+2 |
0.0 |
566 |
300/382 (79%) |
13101.m02077 protein protein phosphatase 2C, putative, expressed |
| TAIR PP10 |
AT3G62260.1 |
+2 |
3e-124 |
376 |
200/319 (63%) |
Protein phosphatase 2C family protein | chr3:23038516-23040391 REVERSE LENGTH=383 |
