MLOC_12309 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains40.653335.540238.987729.4779
LEAShoots from the seedlings (10 cm shoot stage)34.65628.069741.757524.647
INF1Young developing inflorescences (5mm)32.053934.593334.062422.268
INF2Developing inflorescences (1-1.5 cm)32.023632.29833.529828.5779
ROORoots from the seedlings (10 cm shoot stage)68.522443.744949.057144.4515
NODDeveloping tillers at six leaf stage, 3rd internode31.541736.413639.8329102.364
CAR5Developing grain, bracts removed (5 DPA)48.655655.646754.128338.7601
CAR15Developing grain, bracts removed (15 DPA)27.551626.684126.079447.0851



CDS Structure of MLOC_12309






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12309.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12309.1CUST_1871_PI427708083AvailableAvailablecontig_1563020 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g43470.1 -3 6e-123 360 190/208 (91%) 13108.m04710 protein ER lumen protein retaining receptor, putative, expressed
TAIR PP10 AT1G75760.1 -3 1e-116 343 176/208 (85%) ER lumen protein retaining receptor family protein | chr1:28446940-28448421 REVERSE LENGTH=272