- Predicted Gene MLOC_12309
MLOC_12309 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 40.6533 | 35.5402 | 38.9877 | 29.4779 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 34.656 | 28.0697 | 41.7575 | 24.647 |
| INF1 | Young developing inflorescences (5mm) | 32.0539 | 34.5933 | 34.0624 | 22.268 |
| INF2 | Developing inflorescences (1-1.5 cm) | 32.0236 | 32.298 | 33.5298 | 28.5779 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 68.5224 | 43.7449 | 49.0571 | 44.4515 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 31.5417 | 36.4136 | 39.8329 | 102.364 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 48.6556 | 55.6467 | 54.1283 | 38.7601 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 27.5516 | 26.6841 | 26.0794 | 47.0851 |
CDS Structure of MLOC_12309
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12309.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g43470.1 |
-3 |
6e-123 |
360 |
190/208 (91%) |
13108.m04710 protein ER lumen protein retaining receptor, putative, expressed |
| TAIR PP10 |
AT1G75760.1 |
-3 |
1e-116 |
343 |
176/208 (85%) |
ER lumen protein retaining receptor family protein | chr1:28446940-28448421 REVERSE LENGTH=272 |