- Predicted Gene MLOC_12278
MLOC_12278 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12278_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12278_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 802.482 | 379.495 | 402.29 | 377.501 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 312.889 | 133.456 | 177.551 | 138.461 |
INF1 | Young developing inflorescences (5mm) | 605.595 | 705.416 | 842.052 | 404.749 |
INF2 | Developing inflorescences (1-1.5 cm) | 626.315 | 659.722 | 565.699 | 499.477 |
ROO | Roots from the seedlings (10 cm shoot stage) | 677.646 | 406.205 | 411.568 | 370.812 |
NOD | Developing tillers at six leaf stage, 3rd internode | 85.5096 | 156.967 | 219.585 | 385.88 |
CAR5 | Developing grain, bracts removed (5 DPA) | 328.861 | 369.143 | 385.043 | 239.582 |
CAR15 | Developing grain, bracts removed (15 DPA) | 208.208 | 188.913 | 203.387 | 334.293 |
CDS Structure of MLOC_12278
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12278.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g08050.1 |
-1 |
2e-20 |
92 |
44/47 (94%) |
13103.m30164 protein elongation factor Tu, putative, expressed |
TAIR PP10 |
AT1G07930.2 |
-1 |
5e-20 |
89 |
42/47 (89%) |
GTP binding Elongation factor Tu family protein | chr1:2459014-2460458 FORWARD LENGTH=372 |