- Predicted Gene MLOC_12275
MLOC_12275 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12275_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12275_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 7.2773 | 8.00188 | 7.88048 | 7.33298 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.67183 | 4.55654 | 5.99592 | 4.62387 |
INF1 | Young developing inflorescences (5mm) | 4.30894 | 3.67196 | 5.29631 | 3.53776 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.08191 | 6.79161 | 6.34693 | 6.06327 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.2445 | 13.6028 | 8.97301 | 14.1984 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.09223 | 6.55998 | 5.46395 | 19.726 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.9023 | 4.8428 | 5.05794 | 4.56287 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.580346 | 0.645422 | 0.619986 | 1.4164 |
CDS Structure of MLOC_12275
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12275.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g16146.1 |
-2 |
7e-140 |
410 |
221/308 (72%) |
13101.m01794 protein phenazine biosynthesis protein, putative, expressed |
TAIR PP10 |
AT4G02860.1 |
-2 |
3e-85 |
269 |
142/300 (47%) |
Phenazine biosynthesis PhzC/PhzF protein | chr4:1268952-1270508 REVERSE LENGTH=313 |