MLOC_12259 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.045524800.0906412
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.6350340.5863680.7865530.617033
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.01095900.118909
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_12259






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12259.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12259.1CUST_1865_PI427708083AvailableAvailablecontig_1562895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g33800.2 -3 5e-37 140 84/110 (76%) 13101.m14941 protein heat shock protein DnaJ, putative, expressed
TAIR PP10 AT1G65280.1 -3 1e-22 99 58/123 (47%) DNAJ heat shock N-terminal domain-containing protein | chr1:24245501-24248521 FORWARD LENGTH=588