- Predicted Gene MLOC_12233
MLOC_12233 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12233_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12233_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 62.9003 | 65.0112 | 66.3115 | 68.8527 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 37.7684 | 5.33476 | 10.3325 | 14.9976 |
INF1 | Young developing inflorescences (5mm) | 68.017 | 73.2928 | 76.8211 | 66.2611 |
INF2 | Developing inflorescences (1-1.5 cm) | 56.3139 | 58.2241 | 57.1402 | 66.5823 |
ROO | Roots from the seedlings (10 cm shoot stage) | 44.6473 | 54.3954 | 59.5959 | 64.5277 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.48865 | 5.09146 | 0.163517 | 12.3684 |
CAR5 | Developing grain, bracts removed (5 DPA) | 212.781 | 202.311 | 205.838 | 214.628 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.12454 | 3.82644 | 6.30889 | 13.328 |
CDS Structure of MLOC_12233
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12233.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g09930.1 |
-2 |
0.0 |
936 |
460/515 (89%) |
13102.m01095 protein CSLA1 - cellulose synthase-like family A; mannan synthase, expressed |
TAIR PP10 |
AT5G22740.1 |
-2 |
0.0 |
775 |
370/507 (73%) |
| Symbols: ATCSLA02, CSLA02, ATCSLA2, CSLA2 | cellulose synthase-like A02 | chr5:7555379-7559866 REVERSE LENGTH=534 |