MLOC_1223 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9014262.224162.345940
LEAShoots from the seedlings (10 cm shoot stage)2.6947801.167910
INF1Young developing inflorescences (5mm)0.7386810.7388852.816110
INF2Developing inflorescences (1-1.5 cm)5.10221.959022.180190
ROORoots from the seedlings (10 cm shoot stage)2.967122.479342.700670
NODDeveloping tillers at six leaf stage, 3rd internode2.217882.750792.665830
CAR5Developing grain, bracts removed (5 DPA)3.436768.046531.586070
CAR15Developing grain, bracts removed (15 DPA)2.53088000



CDS Structure of MLOC_1223






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK367942
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367942NoneNoneNoneNone
MLOC_1223.1NoneAvailableNonecontig_110544 (Mapped)
MLOC_28220.1NoneAvailableAvailablecontig_1900636 (Not mapped)
MLOC_29080.1NoneAvailableNonecontig_1972741 (Not mapped)
MLOC_46526.1NoneAvailableNonecontig_291675 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----