MLOC_12228 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.442218.147618.800218.2451
LEAShoots from the seedlings (10 cm shoot stage)17.777517.163621.821414.5477
INF1Young developing inflorescences (5mm)13.998614.671814.025310.5081
INF2Developing inflorescences (1-1.5 cm)14.175116.180515.812314.521
ROORoots from the seedlings (10 cm shoot stage)33.11823.815723.547526.5888
NODDeveloping tillers at six leaf stage, 3rd internode23.30926.477624.784171.5415
CAR5Developing grain, bracts removed (5 DPA)18.430320.24319.719616.1437
CAR15Developing grain, bracts removed (15 DPA)4.724634.140464.16448.69625



CDS Structure of MLOC_12228






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361188
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361188CUST_20332_PI427708080NoneNoneNone
MLOC_12228.1NoneAvailableAvailablecontig_1562843 (Mapped)
MLOC_53318.1NoneAvailableNonecontig_38244 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----