MLOC_12214 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.053337600.05687480.0498541
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.4104670.3470770.3794640.416946
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.082351700.07934210.191547



CDS Structure of MLOC_12214






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12214.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12214.1CUST_8904_PI427708080AvailableAvailablecontig_1562819 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g28124.1 -3 6e-175 508 286/468 (61%) 13106.m02900 protein glycosyltransferase, putative, expressed
TAIR PP10 AT3G18180.1 -3 6e-60 207 122/342 (36%) Glycosyltransferase family 61 protein | chr3:6230270-6231878 FORWARD LENGTH=470