- Predicted Gene MLOC_12198
MLOC_12198 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12198_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12198_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 51.426 | 57.8531 | 57.0533 | 42.5843 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 44.8762 | 29.0139 | 32.7463 | 24.8181 |
INF1 | Young developing inflorescences (5mm) | 43.9996 | 40.3612 | 42.0522 | 25.5776 |
INF2 | Developing inflorescences (1-1.5 cm) | 31.6453 | 35.7117 | 32.2455 | 27.4074 |
ROO | Roots from the seedlings (10 cm shoot stage) | 36.9067 | 47.1593 | 42.2176 | 40.663 |
NOD | Developing tillers at six leaf stage, 3rd internode | 54.2371 | 40.9152 | 26.7276 | 103.041 |
CAR5 | Developing grain, bracts removed (5 DPA) | 65.8758 | 65.2634 | 72.3792 | 47.1965 |
CAR15 | Developing grain, bracts removed (15 DPA) | 24.0257 | 22.7395 | 22.744 | 37.279 |
CDS Structure of MLOC_12198
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12198.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g24560.1 |
+2 |
0.0 |
610 |
346/365 (95%) |
13111.m02341 protein protein transport protein, putative, expressed |
TAIR PP10 |
AT3G23660.1 |
+2 |
1e-156 |
485 |
267/362 (74%) |
Sec23/Sec24 protein transport family protein | chr3:8513666-8517729 REVERSE LENGTH=765 |