MLOC_12156 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.197221.888619.69921.8765
LEAShoots from the seedlings (10 cm shoot stage)8.790410.9823351.871483.61757
INF1Young developing inflorescences (5mm)76.659369.517256.984762.0857
INF2Developing inflorescences (1-1.5 cm)55.755775.158557.835179.5709
ROORoots from the seedlings (10 cm shoot stage)3.248712.679610.268516.0799
NODDeveloping tillers at six leaf stage, 3rd internode0.848070.8180410.2737612.6922
CAR5Developing grain, bracts removed (5 DPA)13.964116.264217.913717.9996
CAR15Developing grain, bracts removed (15 DPA)1.114290.6831381.145632.38918



CDS Structure of MLOC_12156






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12156.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12156.1CUST_8895_PI427708080AvailableAvailablecontig_1562674 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g49200.1 +3 0.0 1051 570/693 (82%) 13101.m05115 protein microtubule associated protein, putative, expressed
TAIR PP10 AT5G51600.1 +3 0.0 640 391/721 (54%) | Symbols: PLE, ATMAP65-3, MAP65-3 | Microtubule associated protein (MAP65/ASE1) family protein | chr5:20961061-20964080 REVERSE LENGTH=707