MLOC_1215 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.276414.083814.954853.54231
LEAShoots from the seedlings (10 cm shoot stage)5.654017.505799.291265.14804
INF1Young developing inflorescences (5mm)4.399795.560868.401863.69439
INF2Developing inflorescences (1-1.5 cm)5.188894.169824.633914.13558
ROORoots from the seedlings (10 cm shoot stage)5.322346.054255.358645.64994
NODDeveloping tillers at six leaf stage, 3rd internode8.134499.3468214.216626.2724
CAR5Developing grain, bracts removed (5 DPA)2.645983.384353.474762.37342
CAR15Developing grain, bracts removed (15 DPA)3.72052.353752.323175.41602



CDS Structure of MLOC_1215






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1215.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_1215.1CUST_1853_PI427708083AvailableAvailablecontig_11049 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g08120.2 +3 3e-12 69 49/69 (71%) 13102.m00935 protein calmodulin binding protein, putative, expressed
TAIR PP10None-----