MLOC_12143 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.708842.009711.308081.53001
LEAShoots from the seedlings (10 cm shoot stage)0.6647871.117281.097120.686876
INF1Young developing inflorescences (5mm)0.5231631.252940.3574910.572588
INF2Developing inflorescences (1-1.5 cm)1.893171.018490.4679421.21884
ROORoots from the seedlings (10 cm shoot stage)1.167711.645451.985451.59875
NODDeveloping tillers at six leaf stage, 3rd internode1.0828700.5357320.474709
CAR5Developing grain, bracts removed (5 DPA)26.440925.164518.87720.4532
CAR15Developing grain, bracts removed (15 DPA)10704.48204.988723.4320427.2



CDS Structure of MLOC_12143






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12143.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12143.1CUST_8892_PI427708080AvailableAvailablecontig_1562648 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g12080.1 -3 3e-29 112 65/146 (45%) 13107.m01242 protein LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10None-----