- Predicted Gene MLOC_12101
MLOC_12101 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.58731 | 0.403756 | 0.305791 | 0.432767 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.95334 | 2.78024 | 2.43533 | 1.95906 |
| INF1 | Young developing inflorescences (5mm) | 0.434166 | 0.282287 | 0.601864 | 0.40653 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.514855 | 0.467338 | 0.773611 | 0.672677 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.68768 | 10.7814 | 4.82407 | 11.2472 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.91347 | 5.25646 | 1.5736 | 11.9914 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.659927 | 0.961136 | 1.61769 | 1.16917 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.056162 | 0.154549 | 0.218017 | 0.390214 |
CDS Structure of MLOC_12101
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12101.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g13910.1 |
-3 |
1e-42 |
157 |
97/167 (58%) |
13112.m01481 protein expressed protein |
| TAIR PP10 |
AT5G63350.1 |
-3 |
4e-18 |
86 |
53/144 (37%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 103 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:25380216-25381124 REVERSE LENGTH=302 |