- Predicted Gene MLOC_12089
MLOC_12089 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12089_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12089_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 62.1062 | 52.6732 | 55.7696 | 48.4953 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 58.365 | 41.2385 | 54.8613 | 37.8221 |
INF1 | Young developing inflorescences (5mm) | 44.557 | 49.9379 | 49.6696 | 35.022 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.1405 | 39.4818 | 44.9922 | 37.3061 |
ROO | Roots from the seedlings (10 cm shoot stage) | 77.8115 | 79.9668 | 80.916 | 78.1605 |
NOD | Developing tillers at six leaf stage, 3rd internode | 80.3653 | 48.9966 | 43.3997 | 122.602 |
CAR5 | Developing grain, bracts removed (5 DPA) | 32.7022 | 38.5738 | 35.4906 | 30.3378 |
CAR15 | Developing grain, bracts removed (15 DPA) | 17.6528 | 18.6765 | 18.4343 | 37.4134 |
CDS Structure of MLOC_12089
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12089.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g43824.1 |
+2 |
4e-35 |
125 |
53/64 (83%) |
13104.m04360 protein expressed protein |
TAIR PP10 |
AT1G06515.2 |
+2 |
2e-18 |
79 |
34/55 (62%) |
Protein of unknown function (DUF3317) | chr1:1990951-1991968 REVERSE LENGTH=56 |