- Predicted Gene MLOC_12083
MLOC_12083 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12083_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12083_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 30.0204 | 20.2355 | 20.5928 | 20.8907 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 22.1798 | 4.50928 | 12.8706 | 9.61357 |
INF1 | Young developing inflorescences (5mm) | 99.6815 | 132.718 | 149.184 | 111.502 |
INF2 | Developing inflorescences (1-1.5 cm) | 73.6497 | 106.355 | 90.1518 | 100.53 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.0097 | 18.8736 | 24.8168 | 18.2253 |
NOD | Developing tillers at six leaf stage, 3rd internode | 47.6922 | 198.251 | 3.7288 | 352.221 |
CAR5 | Developing grain, bracts removed (5 DPA) | 59.4818 | 69.5749 | 62.298 | 61.6289 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.4297 | 0.664514 | 0.991438 | 2.54647 |
CDS Structure of MLOC_12083
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12083.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g51040.1 |
-3 |
1e-132 |
393 |
220/264 (83%) |
13102.m05799 protein expansin precursor, putative, expressed |
TAIR PP10 |
AT1G69530.2 |
-3 |
2e-108 |
328 |
170/227 (75%) |
| Symbols: ATEXPA1, EXP1, AT-EXP1, ATEXP1, ATHEXP ALPHA 1.2, EXPA1 | expansin A1 | chr1:26142034-26143051 FORWARD LENGTH=250 |