- Predicted Gene MLOC_12066
MLOC_12066 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12066_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12066_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.84311 | 8.86227 | 8.12525 | 9.40195 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.71819 | 5.38052 | 5.27364 | 5.51442 |
INF1 | Young developing inflorescences (5mm) | 12.4386 | 11.0437 | 9.72738 | 10.2068 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.4124 | 14.4531 | 12.7833 | 17.0373 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.32053 | 8.97431 | 6.95348 | 12.0855 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.06438 | 1.58032 | 2.24363 | 6.19299 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.5069 | 12.0144 | 11.6386 | 13.3327 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.96141 | 4.67491 | 3.33462 | 11.2453 |
CDS Structure of MLOC_12066
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12066.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g41090.1 |
-1 |
0.0 |
917 |
461/517 (89%) |
13105.m04355 protein CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
TAIR PP10 |
AT3G10660.1 |
-1 |
1e-74 |
265 |
163/442 (37%) |
| Symbols: CPK2, ATCPK2 | calmodulin-domain protein kinase cdpk isoform 2 | chr3:3331599-3334268 REVERSE LENGTH=646 |