- Predicted Gene MLOC_12052
MLOC_12052 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12052_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12052_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.731629 | 0.82269 | 0.812101 | 0.899828 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.473 | 1.02391 | 0.897296 | 1.10302 |
INF1 | Young developing inflorescences (5mm) | 9.02082 | 9.06809 | 9.56468 | 8.44758 |
INF2 | Developing inflorescences (1-1.5 cm) | 31.27 | 31.59 | 35.358 | 38.399 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.822121 | 1.7853 | 0.808884 | 2.33447 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.1219 | 8.22606 | 6.60376 | 32.3938 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.6116 | 11.2399 | 12.4358 | 12.9833 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.61815 | 1.81972 | 1.45533 | 4.0556 |
CDS Structure of MLOC_12052
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12052.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g32930.1 |
-3 |
0.0 |
926 |
484/596 (81%) |
13109.m03296 protein retrotransposon protein, putative, SINE subclass, expressed |
TAIR PP10 |
AT1G67370.1 |
-3 |
0.0 |
610 |
326/595 (55%) |
| Symbols: ASY1, ATASY1 | DNA-binding HORMA family protein | chr1:25239347-25243713 REVERSE LENGTH=596 |