MLOC_12009 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.02071930.0302520.0246007
LEAShoots from the seedlings (10 cm shoot stage)3.326113.76012.134752.45287
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.01597070.044560.0343537
ROORoots from the seedlings (10 cm shoot stage)00.092146300.252064
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.019161300.0213165
CAR15Developing grain, bracts removed (15 DPA)0.02030220.04365760.05912030.0933698



CDS Structure of MLOC_12009






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12009.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248713.1NoneNoneNoneNone
MLOC_12009.1CUST_1111_PI427708080AvailableAvailablecontig_1562323 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08020.1 -3 0.0 1082 561/664 (84%) 13101.m00831 protein boron transporter protein, putative, expressed
TAIR PP10 AT1G15460.1 -3 0.0 858 439/666 (66%) | Symbols: ATBOR4, BOR4 | HCO3- transporter family | chr1:5310196-5313376 REVERSE LENGTH=683