MLOC_11992 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.342430.1363550.4341250.275251
LEAShoots from the seedlings (10 cm shoot stage)0.1135180.3158670.8051430.360335
INF1Young developing inflorescences (5mm)0.05631630.03230780.07201250.0463458
INF2Developing inflorescences (1-1.5 cm)0.1107950.02595030.1357440.101374
ROORoots from the seedlings (10 cm shoot stage)1.263720.6317490.389980.826819
NODDeveloping tillers at six leaf stage, 3rd internode0.9643571.056941.137783.07062
CAR5Developing grain, bracts removed (5 DPA)0.3558650.66980.4983260.552004
CAR15Developing grain, bracts removed (15 DPA)0.4310350.5750160.626491.40091



CDS Structure of MLOC_11992






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11992.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11992.1CUST_11351_PI427708083AvailableAvailablecontig_1562308 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01940.2 +3 1e-65 229 114/158 (72%) 13108.m00127 protein non-lysosomal glucosylceramidase, putative, expressed
TAIR PP10 AT3G24180.2 +3 3e-32 131 61/98 (62%) Beta-glucosidase, GBA2 type family protein | chr3:8735011-8741147 REVERSE LENGTH=950