- Predicted Gene MLOC_11977
MLOC_11977 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.81877 | 4.95217 | 5.64676 | 5.64896 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.78258 | 8.79075 | 8.37756 | 8.45732 |
| INF1 | Young developing inflorescences (5mm) | 0.146343 | 0.117139 | 0.0792428 | 0.114498 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.106118 | 0.0197948 | 0.0655859 | 0.0739544 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.82036 | 5.5775 | 4.94006 | 7.91424 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 30.2793 | 28.8077 | 19.8577 | 94.4078 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.52644 | 5.85189 | 5.80334 | 6.91763 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.341297 | 0.42911 | 0.627544 | 1.25491 |
CDS Structure of MLOC_11977
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11977.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g58490.2 |
+1 |
5e-55 |
206 |
172/426 (40%) |
13103.m06423 protein DUF593 domain containing protein, expressed |
| TAIR PP10 |
AT2G30690.1 |
+1 |
3e-16 |
84 |
42/79 (53%) |
Protein of unknown function, DUF593 | chr2:13076229-13078595 FORWARD LENGTH=760 |
