- Predicted Gene MLOC_11960
MLOC_11960 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_11960_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_11960_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 113.466 | 107.745 | 118.905 | 127.199 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.66149 | 11.508 | 19.1582 | 12.0359 |
INF1 | Young developing inflorescences (5mm) | 0.115003 | 0 | 0 | 0.105396 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.215919 | 0 | 0.152755 | 0.211446 |
ROO | Roots from the seedlings (10 cm shoot stage) | 41.4405 | 18.9795 | 29.6904 | 30.3841 |
NOD | Developing tillers at six leaf stage, 3rd internode | 31.5964 | 14.0359 | 2.22686 | 38.4562 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.40946 | 5.9686 | 3.63312 | 5.23182 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.44291 | 8.13967 | 2.44481 | 14.5826 |
CDS Structure of MLOC_11960
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11960.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g34910.1 |
+3 |
5e-83 |
257 |
128/207 (62%) |
13110.m03118 protein secretory protein, putative, expressed |
TAIR PP10 |
AT2G15220.1 |
+3 |
7e-71 |
224 |
107/205 (52%) |
Plant basic secretory protein (BSP) family protein | chr2:6608689-6609366 FORWARD LENGTH=225 |