MLOC_11956 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.284311.363471.356931.89987
LEAShoots from the seedlings (10 cm shoot stage)0.2515230.19420200.189932
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)5.952743.821473.105014.92715
NODDeveloping tillers at six leaf stage, 3rd internode00.2122960.9397861.56002
CAR5Developing grain, bracts removed (5 DPA)000.04954530.0533912
CAR15Developing grain, bracts removed (15 DPA)0.03610760.04155990.05277570.117634



CDS Structure of MLOC_11956






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11956.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11956.1CUST_11350_PI427708083AvailableAvailablecontig_1562225 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13800.1 -1 4e-27 109 67/141 (48%) 13102.m01534 protein HSF-type DNA-binding domain containing protein, expressed
TAIR PP10None-----