- Predicted Gene MLOC_11952
MLOC_11952 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_11952_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_11952_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 37.6401 | 53.8554 | 46.5201 | 48.2294 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 21.8034 | 1.95441 | 1.59378 | 7.75414 |
INF1 | Young developing inflorescences (5mm) | 203.463 | 199.292 | 176.783 | 165.086 |
INF2 | Developing inflorescences (1-1.5 cm) | 130.906 | 197.041 | 148.05 | 175.287 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.6694 | 35.0018 | 29.8249 | 38.9058 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.158078 | 0.29675 | 0.0833004 | 0.883161 |
CAR5 | Developing grain, bracts removed (5 DPA) | 79.9943 | 77.6835 | 73.5429 | 73.0583 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.436 | 3.40301 | 5.18072 | 10.2981 |
CDS Structure of MLOC_11952
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11952.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g12570.1 |
-1 |
0.0 |
1006 |
513/795 (65%) |
13103.m01440 protein expressed protein |
TAIR PP10 |
AT1G69770.1 |
-1 |
0.0 |
744 |
398/784 (51%) |
| Symbols: CMT3 | chromomethylase 3 | chr1:26248496-26253519 REVERSE LENGTH=839 |