- Predicted Gene MLOC_11950
MLOC_11950 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.42835 | 1.52329 | 1.36478 | 1.7553 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.722 | 27.2679 | 29.9603 | 26.066 |
| INF1 | Young developing inflorescences (5mm) | 0.379659 | 0.438428 | 0.319172 | 0.414555 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.385401 | 0.25388 | 0.545704 | 0.496673 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.108683 | 0.137069 | 0.227847 | 0.19472 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.90363 | 9.0279 | 7.3764 | 36.6619 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.72674 | 5.42627 | 3.61257 | 6.01257 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0444808 | 0.281029 | 0.189003 | 0.466399 |
CDS Structure of MLOC_11950
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11950.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g11230.1 |
+3 |
2e-71 |
221 |
119/169 (70%) |
13103.m01266 protein expressed protein |
| TAIR PP10 |
AT2G03420.1 |
+3 |
3e-53 |
174 |
81/120 (68%) |
unknown protein; Has 38 Blast hits to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:1035100-1035937 REVERSE LENGTH=170 |