- Predicted Gene MLOC_11949
MLOC_11949 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.45381 | 4.34629 | 4.60754 | 3.59972 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.75805 | 6.36417 | 6.60023 | 4.62063 |
| INF1 | Young developing inflorescences (5mm) | 7.22407 | 8.00304 | 8.76417 | 5.2864 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.86624 | 9.3072 | 8.63433 | 7.96806 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.23428 | 3.79829 | 3.70505 | 3.47157 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.26988 | 4.60049 | 3.98511 | 12.1351 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.2608 | 5.01665 | 6.13367 | 4.05235 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.56424 | 1.92329 | 2.80455 | 4.24514 |
CDS Structure of MLOC_11949
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11949.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g11240.1 |
+2 |
4e-60 |
228 |
122/188 (65%) |
13103.m01267 protein nucleotidyltransferase, putative, expressed |
| TAIR PP10 |
AT2G03420.1 |
-2 |
7e-26 |
108 |
58/110 (53%) |
unknown protein; Has 38 Blast hits to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:1035100-1035937 REVERSE LENGTH=170 |