MLOC_11945 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.155424.665625.242424.9629
LEAShoots from the seedlings (10 cm shoot stage)28.703222.660322.151619.9727
INF1Young developing inflorescences (5mm)21.085622.82925.730419.9273
INF2Developing inflorescences (1-1.5 cm)19.427217.957324.971323.0485
ROORoots from the seedlings (10 cm shoot stage)24.178533.203833.937336.9528
NODDeveloping tillers at six leaf stage, 3rd internode42.732927.543427.167980.434
CAR5Developing grain, bracts removed (5 DPA)22.746626.128823.957125.308
CAR15Developing grain, bracts removed (15 DPA)9.898639.8679910.146524.6918



CDS Structure of MLOC_11945






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251442.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251442.1CUST_19011_PI427708080NoneNoneNone
MLOC_11945.1NoneAvailableAvailablecontig_1562202 (Mapped)
MLOC_39050.1NoneAvailableNonecontig_2552137 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----