MLOC_11943 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.992442.311442.847943.1118
LEAShoots from the seedlings (10 cm shoot stage)41.255657.702742.270345.7888
INF1Young developing inflorescences (5mm)31.372634.574635.185830.6143
INF2Developing inflorescences (1-1.5 cm)32.70938.810935.383341.4448
ROORoots from the seedlings (10 cm shoot stage)24.8845.430841.93360.4912
NODDeveloping tillers at six leaf stage, 3rd internode60.012848.454247.3425180.974
CAR5Developing grain, bracts removed (5 DPA)51.79650.249450.799652.5697
CAR15Developing grain, bracts removed (15 DPA)30.356330.188533.229873.9886



CDS Structure of MLOC_11943






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11943.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365110NoneNoneNoneNone
MLOC_11943.1CUST_1096_PI427708080AvailableAvailablecontig_1562199 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g56580.2 -2 0.0 1234 646/698 (93%) 13101.m05994 protein CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed
TAIR PP10 AT3G03940.1 -2 0.0 1062 536/702 (76%) Protein kinase family protein | chr3:1014412-1018244 REVERSE LENGTH=701