MLOC_11922 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0586927000.0473603
LEAShoots from the seedlings (10 cm shoot stage)000.1704120.13268
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.0574280.4752130.180209
NODDeveloping tillers at six leaf stage, 3rd internode00.02229250.04649240.114076
CAR5Developing grain, bracts removed (5 DPA)0.5733341.148750.3291420.653519
CAR15Developing grain, bracts removed (15 DPA)15.155313.984117.67533.0856



CDS Structure of MLOC_11922






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11922.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11922.1CUST_1828_PI427708083AvailableAvailablecontig_1562157 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05550.1 -2 3e-164 469 226/323 (70%) 13106.m00542 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT3G16370.1 -2 7e-128 375 180/316 (57%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr3:5556928-5558351 FORWARD LENGTH=353