MLOC_11916 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.116910.886313.340813.508
LEAShoots from the seedlings (10 cm shoot stage)11.32383.665283.893065.79279
INF1Young developing inflorescences (5mm)29.114629.865930.046728.679
INF2Developing inflorescences (1-1.5 cm)19.181924.104723.272527.7231
ROORoots from the seedlings (10 cm shoot stage)5.024188.007310.008211.11
NODDeveloping tillers at six leaf stage, 3rd internode9.6693210.67610.503338.6058
CAR5Developing grain, bracts removed (5 DPA)5.335225.258984.672295.65064
CAR15Developing grain, bracts removed (15 DPA)2.033660.5751952.035393.79463



CDS Structure of MLOC_11916






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11916.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11916.3CUST_8854_PI427708080AvailableAvailablecontig_1562137 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g32540.1 +1 0.0 763 379/444 (85%) 13104.m03116 protein OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed
TAIR PP10 AT1G28110.2 +1 0.0 674 319/437 (73%) | Symbols: SCPL45 | serine carboxypeptidase-like 45 | chr1:9804153-9806832 REVERSE LENGTH=461